Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015906217.1_cds_XP_016456440.1_50272
CDS Infomation

[gene=LOC107780414] [db_xref=GeneID:107780414] [protein=CRM-domain containing factor CFM3, chloroplastic/mitochondrial-like isoform X3] [protein_id=XP_016456440.1] [location=complement(join(8343..8531,8613..9527,9946..10606,10705..10742))] [gbkey=CDS]
Sequence

ATGTTCGTTTCCAGATACATTCAACGGCGCTCCTTGCAGAATGCGATTCTGCGGAGATAC
GATATGGTGAATATGATTTCAAGCGGTGAAGTAAAAAATGTGGAAGTTCCTATATTTACT
GCAACGAGTAAGGTGTGGAATTGCGTGCGGTGGATGTCGGGGAAGAGCATGAGGAGCAGA
GTAGCAATGAGAATGCAGAATGAGTCAAGCAAAACCCTAAGGGAGATACGGAGGTCAAAG
AAGTTGAAATTGAAGCTGATGACTGATGAAGAACGGTTAATTTATAATCTCCGTAGAGCA
AAGAAAAAAGTTGCTTTGCTACTTCAGAAGCTGAAGAAATATGAGCTACCAGAGTTGCCA
TCTCCACGGCATGATCCTGAGCTTCTCACTCCTGAGCAACTGCAAGCGTATAAGAAGATT
GGTTTCAGGAATAAAAATTATGTTCCTGTTGGTGTTCGTGGAGTCTTCGGTGGAGTTGTC
CAAAATATGCATCTCCACTGGAAGTTTCATGAGACTGTACAAGTTTGTTGTGATAACTTC
CCTAAGGAAAAAATTAAAGAGATGGCCTCAATGCTGGCTCGACTAAGTGGCGGTATTGTG
GTTAACATACACAATGTAAAAACCATTATTATGTTTCGCGGCAGAAACTACCGCCAGCCT
AAGAATTTAATACCTATCAACACACTTACAAAAAGGAAGGCATTATTTAAAGCCCGATTC
GAACAAGCACTAGAATCACAGAAATTAAACATAAAGAAAATAGAACAAGAGCTCCGGAGG
AAGGGGATAAATCCTGATGATCCAGCAGCCAGGGCCAGCATCCAGCGAGTAGCATCCACA
TTCTTCAATGCCATTGATAAGAAAGAAGGAAGCCCATATGTCTTTCAGGAGGATACTGGT
ACTAAGTTGGGTCTCAGCAGTAGTATAGACCAAACACATTCAACAGCTGAAGACAGTGAC
CAGGAAGAACTTGACCGTTTTATTGCTCAGATAGAACAGGCAGCTGATGACGAATGGGCA
GCTGAGGAAGAAGCAGAGAAAGACGAAGTAGGGAAGATTAGATATTGGAACAAAGAAGAT
ATAGGTAGTCGATTCAGAAGATCTGGAATGATGGGAAGTGATGAATCAGATGATGAGTCA
GGAGGGAGAACAAGTGGCTGGAATAAGACTTACGGAAGGAAGATAGCTGATGATGATGGA
CATGATGATGTATCTGAAGATGACAATGAATTGGATAACAATGATGACCAACGTGGTAGA
AGCAATTACGCTGATTCCGGCATGTACAAGGCTCCTGACAGGCATCCTAAGTATAAAACG
GAGAAATGGCAGAAAGGTAAGAGCAGTAAACCTATAAGTGAGGGAGGTTCAAGCAGAAAT
TTTGATCCTTATTTAAAGGGAAAGATGGGTACAGAAGGTTCTGGTTCAGACATGTTAAGT
GACCTTGAGGAAGCCATGTGGAATTCAGATGATGAGGGAGGGCAGCACTCAATGCCACCA
AGTGAGTATGGAAGTAGTAGTGACGAGGGGGAGGATTATGATAATTCAGATGATGAGGGA
GGGCAGCACTCAATGCCACCAAGTGAGTATAGAAGTAGTAGTGACGAGGGGGAGGATTAT
GATAAGGTAGCAACATTGGGATCAAGTGCAGAGGATGCACCCGGTTCAAGGGCATCAAGA
GGGGTAACTAATAGCTTTAGGACAAGTAGTCAAGAGCAGATGAAGAAAAATGAGGGTACT
TCCGAGAGCAAGACAAAGGTGAAAAGCTCAAAGGACTTGGATGAAACTTGGGACAGCGAC
TGA

Peptide Sequence

PEP ID

XP_016456440.1
PEP Infomation

PREDICTED: CRM-domain containing factor CFM3, chloroplastic/mitochondrial-like isoform X3 [Nicotiana tabacum]
Sequence

MFVSRYIQRRSLQNAILRRYDMVNMISSGEVKNVEVPIFTATSKVWNCVRWMSGKSMRSR
VAMRMQNESSKTLREIRRSKKLKLKLMTDEERLIYNLRRAKKKVALLLQKLKKYELPELP
SPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHETVQVCCDNF
PKEKIKEMASMLARLSGGIVVNIHNVKTIIMFRGRNYRQPKNLIPINTLTKRKALFKARF
EQALESQKLNIKKIEQELRRKGINPDDPAARASIQRVASTFFNAIDKKEGSPYVFQEDTG
TKLGLSSSIDQTHSTAEDSDQEELDRFIAQIEQAADDEWAAEEEAEKDEVGKIRYWNKED
IGSRFRRSGMMGSDESDDESGGRTSGWNKTYGRKIADDDGHDDVSEDDNELDNNDDQRGR
SNYADSGMYKAPDRHPKYKTEKWQKGKSSKPISEGGSSRNFDPYLKGKMGTEGSGSDMLS
DLEEAMWNSDDEGGQHSMPPSEYGSSSDEGEDYDNSDDEGGQHSMPPSEYRSSSDEGEDY
DKVATLGSSAEDAPGSRASRGVTNSFRTSSQEQMKKNEGTSESKTKVKSSKDLDETWDSD

Transcript Sequence

Gene sequence data has not been registered.